25 lines
798 B
Python
25 lines
798 B
Python
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import unittest
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from pathlib import Path
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from mirri.io.writers.mirri_excel import write_mirri_excel
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from mirri.io.parsers.mirri_excel import parse_mirri_excel
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TEST_DATA_DIR = Path(__file__).parent / "data"
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class MirriExcelTests(unittest.TestCase):
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def test_valid_excel(self):
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in_path = TEST_DATA_DIR / "valid.mirri.full.xlsx"
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parsed_data = parse_mirri_excel(in_path.open('rb'), version="20200601")
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strains = parsed_data["strains"]
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growth_media = parsed_data["growth_media"]
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out_path = Path("/tmp/test.xlsx")
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write_mirri_excel(out_path, strains, growth_media, version="20200601")
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if __name__ == "__main__":
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# import sys;sys.argv = ['',
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# 'BiolomicsWriter.test_mirri_excel_parser_invalid']
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unittest.main()
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