forked from MIRRI/mirri_utils
47 lines
1.8 KiB
Python
47 lines
1.8 KiB
Python
import unittest
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from .utils import VERSION, SERVER_URL
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from mirri.biolomics.settings import CLIENT_ID, SECRET_ID, USERNAME, PASSWORD
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from mirri.biolomics.remote.biolomics_client import BiolomicsMirriClient, BIBLIOGRAPHY_WS
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from mirri.entities.publication import Publication
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class BiolomicsLiteratureClientTest(unittest.TestCase):
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def setUp(self):
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self.client = BiolomicsMirriClient(SERVER_URL, VERSION, CLIENT_ID,
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SECRET_ID, USERNAME, PASSWORD)
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def test_retrieve_biblio_by_id(self):
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record_id = 100
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record_name = "Miscellaneous notes on Mucoraceae"
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biblio = self.client.retrieve_by_id(BIBLIOGRAPHY_WS, record_id)
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self.assertEqual(biblio.record_id, record_id)
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self.assertEqual(biblio.record_name, record_name)
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def test_retrieve_media_by_id(self):
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record_id = 100
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record_name = "Miscellaneous notes on Mucoraceae"
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biblio = self.client.retrieve_by_name(BIBLIOGRAPHY_WS, record_name)
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self.assertEqual(biblio.record_id, record_id)
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self.assertEqual(biblio.record_name, record_name)
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self.assertEqual(biblio.year, 1994)
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self.assertEqual(biblio.volume, '50')
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def test_create_biblio(self):
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pub = Publication()
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pub.pubmed_id = 'PM18192'
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pub.journal = 'my_journal'
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pub.title = 'awesome title'
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pub.authors = 'pasdas, aposjdasd, alsalsfda'
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pub.volume = 'volume 0'
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record_id = None
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try:
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new_pub = self.client.create(BIBLIOGRAPHY_WS, pub)
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record_id = new_pub.record_id
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self.assertEqual(new_pub.title, pub.title)
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self.assertEqual(new_pub.volume, pub.volume)
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finally:
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if record_id is not None:
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self.client.delete_by_id(BIBLIOGRAPHY_WS, record_id)
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