forked from MIRRI/mirri_utils
63 lines
2.5 KiB
Python
63 lines
2.5 KiB
Python
import unittest
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from mirri.biolomics.remote.endoint_names import GROWTH_MEDIUM_WS
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from mirri.biolomics.serializers.growth_media import GrowthMedium
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from mirri.biolomics.settings import CLIENT_ID, SECRET_ID, USERNAME, PASSWORD
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from mirri.biolomics.remote.biolomics_client import BiolomicsMirriClient
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from tests.biolomics.utils import SERVER_URL, VERSION
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class BiolomicsSequenceClientTest(unittest.TestCase):
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def setUp(self):
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self.client = BiolomicsMirriClient(SERVER_URL, VERSION, CLIENT_ID,
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SECRET_ID, USERNAME, PASSWORD)
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def test_retrieve_media_by_id(self):
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record_id = 101
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growth_medium = self.client.retrieve_by_id('growth_medium', record_id)
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self.assertEqual(growth_medium.record_id, record_id)
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self.assertEqual(growth_medium.record_name, 'MA2PH6')
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def test_retrieve_media_by_id(self):
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record_name = 'MA2PH6'
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record_id = 101
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growth_medium = self.client.retrieve_by_name('growth_medium', record_name)
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self.assertEqual(growth_medium.record_id, record_id)
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self.assertEqual(growth_medium.record_name, record_name)
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def test_create_growth_media(self):
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self.client.start_transaction()
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try:
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growth_medium = GrowthMedium()
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growth_medium.acronym = 'BBB'
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growth_medium.ingredients = 'alkhdflakhf'
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growth_medium.description = 'desc'
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new_growth_medium = self.client.create(GROWTH_MEDIUM_WS, growth_medium)
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print(new_growth_medium.dict())
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finally:
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self.client.rollback()
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def test_update_growth_media(self):
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self.client.start_transaction()
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try:
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growth_medium = GrowthMedium()
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growth_medium.acronym = 'BBB'
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growth_medium.ingredients = 'alkhdflakhf'
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growth_medium.description = 'desc'
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growth_medium.full_description = 'full'
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new_growth_medium = self.client.create(GROWTH_MEDIUM_WS, growth_medium)
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new_growth_medium.full_description = 'full2'
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updated_gm = new_growth_medium = self.client.update(GROWTH_MEDIUM_WS, new_growth_medium)
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self.assertEqual(updated_gm.full_description, new_growth_medium.full_description)
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retrieved = self.client.retrieve_by_id(GROWTH_MEDIUM_WS, new_growth_medium.record_id)
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self.assertEqual(retrieved.full_description, updated_gm.full_description)
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finally:
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self.client.rollback()
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