forked from MIRRI/mirri_utils
18-07
This commit is contained in:
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@@ -19,12 +19,6 @@ from mirri.settings import (COMMERCIAL_USE_WITH_AGREEMENT, GENOMIC_INFO,
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NAGOYA_PROBABLY_SCOPE, NO_RESTRICTION,
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ONLY_RESEARCH, ONTOBIOTOPE,
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PUBLICATION_FIELDS, STRAINS, SUBTAXAS)
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from mirri.settings_v1 import (COMMERCIAL_USE_WITH_AGREEMENT, GENOMIC_INFO,
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GROWTH_MEDIA, LITERATURE_SHEET, LOCATIONS,
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MIRRI_FIELDS, NAGOYA_DOCS_AVAILABLE, NAGOYA_NO_RESTRICTIONS,
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NAGOYA_PROBABLY_SCOPE, NO_RESTRICTION,
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ONLY_RESEARCH, ONTOBIOTOPE,
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PUBLICATION_FIELDS, STRAINS, SUBTAXAS)
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from mirri.utils import get_country_from_name
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RESTRICTION_USE_TRANSLATOR = {
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@@ -44,34 +38,12 @@ TRUEFALSE_TRANSLATOR = {
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def parse_mirri_excel(fhand, version=""):
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if version == "20200602":
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return _parse_mirri_v20200601(fhand)
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elif version == "12052023":
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if version == "5.1.2":
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return _parse_mirri_v12052023(fhand)
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else:
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raise NotImplementedError("Only versions 20200601 and 12052023 are implemented")
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raise NotImplementedError("Only version is 5.1.2 implemented")
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def _parse_mirri_v20200601(fhand):
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fhand.seek(0)
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file_content = BytesIO(fhand.read())
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wb = load_workbook(filename=file_content, read_only=True, data_only=True)
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locations = workbook_sheet_reader(wb, LOCATIONS)
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ontobiotopes = workbook_sheet_reader(wb, ONTOBIOTOPE)
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growth_media = list(parse_growth_media(wb))
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markers = workbook_sheet_reader(wb, GENOMIC_INFO)
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publications = list(parse_publications(wb))
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strains = parse_strains(wb, locations=locations, growth_media=growth_media,
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markers=markers, publications=publications,
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ontobiotopes=ontobiotopes)
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return {"strains": strains, "growth_media": growth_media}
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def _parse_mirri_v12052023(fhand):
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fhand.seek(0)
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file_content = BytesIO(fhand.read())
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@@ -5,7 +5,6 @@ from openpyxl.workbook.workbook import Workbook
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from mirri import rgetattr
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from mirri.settings import GROWTH_MEDIA, MIRRI_FIELDS, DATA_DIR, PUBLICATION_FIELDS
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from mirri.settings_v1 import GROWTH_MEDIA, MIRRI_FIELDS, DATA_DIR, PUBLICATION_FIELDS
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from mirri.io.parsers.mirri_excel import NAGOYA_TRANSLATOR, RESTRICTION_USE_TRANSLATOR
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INITIAL_SEXUAL_STATES = [
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@@ -51,81 +50,9 @@ PUB_HEADERS = [pb["label"] for pb in PUBLICATION_FIELDS]
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def write_mirri_excel(path, strains, growth_media, version):
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if version == "20200601":
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_write_mirri_excel_20200601(path, strains, growth_media)
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if version == "12052023":
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if version == "5.1.2":
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_write_mirri_excel_12052023(path, strains, growth_media)
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def _write_mirri_excel_20200601(path, strains, growth_media):
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wb = Workbook()
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write_markers_sheet(wb)
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ontobiotope_path = DATA_DIR / "ontobiotopes.csv"
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write_ontobiotopes(wb, ontobiotope_path)
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write_growth_media(wb, growth_media)
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growth_media_indexes = [str(gm.acronym) for gm in growth_media]
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locations = {}
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publications = {}
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sexual_states = set(deepcopy(INITIAL_SEXUAL_STATES))
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genomic_markers = {}
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strains_data = _deserialize_strains(strains, locations, growth_media_indexes,
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publications, sexual_states, genomic_markers)
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strains_data = list(strains_data)
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# write strain to generate indexed data
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strain_sheet = wb.create_sheet("Strains")
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strain_sheet.append([field["label"] for field in MIRRI_FIELDS])
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for strain_row in strains_data:
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strain_sheet.append(strain_row)
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redimension_cell_width(strain_sheet)
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# write locations
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loc_sheet = wb.create_sheet("Geographic origin")
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loc_sheet.append(["ID", "Country", "Region", "City", "Locality"])
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for index, loc_index in enumerate(locations.keys()):
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location = locations[loc_index]
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row = [index, location.country, location.state, location.municipality,
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loc_index]
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loc_sheet.append(row)
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redimension_cell_width(loc_sheet)
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# write publications
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pub_sheet = wb.create_sheet("Literature")
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pub_sheet.append(PUB_HEADERS)
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for publication in publications.values():
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row = []
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for pub_field in PUBLICATION_FIELDS:
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# if pub_field['attribute'] == 'id':
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# value = index
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value = getattr(publication, pub_field['attribute'], None)
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row.append(value)
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pub_sheet.append(row)
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redimension_cell_width(pub_sheet)
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# write sexual states
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sex_sheet = wb.create_sheet("Sexual state")
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for sex_state in sorted(list(sexual_states)):
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sex_sheet.append([sex_state])
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redimension_cell_width(sex_sheet)
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# write genetic markers
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markers_sheet = wb.create_sheet("Genomic information")
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markers_sheet.append(['Strain AN', 'Marker', 'INSDC AN', 'Sequence'])
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for strain_id, markers in genomic_markers.items():
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for marker in markers:
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row = [strain_id, marker.marker_type, marker.marker_id, marker.marker_seq]
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markers_sheet.append(row)
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redimension_cell_width(markers_sheet)
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del wb["Sheet"]
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wb.save(str(path))
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def _write_mirri_excel_12052023(path, strains, growth_media):
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wb = Workbook()
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-311
@@ -1,311 +0,0 @@
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from pathlib import Path
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from charset_normalizer import VERSION
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DATA_DIR = Path(__file__).parent / "data"
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ACCESSION_NUMBER = "accession_number"
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RESTRICTION_ON_USE = "restriction_on_use"
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NAGOYA_PROTOCOL = "nagoya_protocol"
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ABS_RELATED_FILES = "abs_related_files"
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MTA_FILES = "mta_file"
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OTHER_CULTURE_NUMBERS = "other_culture_collection_numbers"
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STRAIN_FROM_REGISTERED_COLLECTION = "strain_from_a_registered_collection"
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RISK_GROUP = "risk_group"
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DUAL_USE = "dual_use"
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QUARANTINE = "quarantine"
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ORGANISM_TYPE = "organism_type"
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TAXON_NAME = "taxon_name"
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INFRASUBSPECIFIC_NAME = "infrasubspecific_names"
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COMMENTS_ON_TAXONOMY = "comments_on_taxonomy"
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STATUS = "status"
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HISTORY_OF_DEPOSIT = "history_of_deposit"
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DEPOSITOR = "depositor"
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DATE_OF_DEPOSIT = "date_of_deposit"
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COLLECTED_BY = "collected_by"
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DATE_OF_COLLECTION = "date_of_collection"
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ISOLATED_BY = "isolated_by"
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DATE_OF_ISOLATION = "date_of_isolation"
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DATE_OF_INCLUSION = "date_of_inclusion_on_catalog"
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TESTED_TEMPERATURE_GROWTH_RANGE = "tested_temperature_growth_range"
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RECOMMENDED_GROWTH_TEMP = "recommended_growth_temperature"
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RECOMMENDED_GROWTH_MEDIUM = "recommended_media_for_growth"
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FORM_OF_SUPPLY = "form_of_supply"
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GEO_COORDS = "coordinates_of_geographic_origin"
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ACCESSION_NAME = "other_denomination"
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ALTITUDE = "altitude_of_geographic_origin"
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GEOGRAPHIC_ORIGIN = "geographic_origin"
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GMO = "gmo"
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GMO_CONSTRUCTION_INFO = "gmo_construction_information"
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MUTANT_INFORMATION = "mutant_information"
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GENOTYPE = "genotype"
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LITERATURE = "literature"
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SEXUAL_STATE = "sexual_state"
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PLOIDY = "ploidy"
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INTERSPECIFIC_HYBRID = "interspecific_hybrid"
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HYBRIDS = 'hybrids'
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PLANT_PATHOGENICITY_CODE = "plant_pathogenicity_code"
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PATHOGENICITY = "pathogenicity"
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ENZYME_PRODUCTION = "enzyme_production"
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PRODUCTION_OF_METABOLITES = "production_of_metabolites"
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APPLICATIONS = "applications"
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REMARKS = "remarks"
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PLASMIDS = "plasmids"
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PLASMIDS_COLLECTION_FIELDS = "plasmids_collections_fields"
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SUBSTRATE_HOST_OF_ISOLATION = "substrate_host_of_isolation"
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ISOLATION_HABITAT = "isolation_habitat"
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ONTOBIOTOPE_ISOLATION_HABITAT = "ontobiotope_term_for_the_isolation_habitat"
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LITERATURE_LINKED_TO_SEQ_GENOME = "literature_linked_to_the_sequence_genome"
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# StrainId
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STRAIN_ID = "id"
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COLLECTION_CODE = "collection_code"
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STRAIN_PUI = "strain_pui"
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STRAIN_URL = "strain_url"
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ID_SYNONYMS = 'id_synonyms'
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# Taxonomy
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GENUS = "genus"
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SPECIES = "species"
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# Location
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COUNTRY = "countryOfOriginCode"
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SITE = "site"
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STATE = "state"
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PROVINCE = "province"
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MUNICIPALITY = "municipality"
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ISLAND = "island"
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OTHER = "other"
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LATITUDE = "latitude"
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LONGITUDE = "longitude"
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ALTITUDE = "altitude"
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GEOREF_METHOD = "georeferencingMethod"
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COORDUNCERTAINTY = "coordUncertainty"
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COORD_SPATIAL_REFERENCE = "coordenatesSpatialReference"
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LOCATION = "location"
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ALLOWED_COLLECTING_SITE_KEYS = [
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COUNTRY,
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STATE,
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PROVINCE,
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ISLAND,
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MUNICIPALITY,
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OTHER,
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SITE,
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LATITUDE,
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LONGITUDE,
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ALTITUDE,
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GEOREF_METHOD,
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COORDUNCERTAINTY,
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COORD_SPATIAL_REFERENCE,
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]
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MIRRI_FIELDS = [
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{"attribute": "id", "label": "Accession number"},
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{"attribute": "restriction_on_use", "label": "Restrictions on use"},
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{"attribute": "nagoya_protocol",
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"label": "Nagoya protocol restrictions and compliance conditions"},
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{"attribute": ABS_RELATED_FILES, "label": "ABS related files"},
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{"attribute": "mta_files", "label": "MTA file"},
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{"attribute": "other_numbers", "label": "Other culture collection numbers"},
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{"attribute": "is_from_registered_collection",
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"label": "Strain from a registered collection"},
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{"attribute": "risk_group", "label": "Risk Group"},
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{"attribute": "is_potentially_harmful", "label": "Dual use"},
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{"attribute": "is_subject_to_quarantine", "label": "Quarantine in Europe"},
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{"attribute": "taxonomy.organism_type", "label": "Organism type"},
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{"attribute": "taxonomy.taxon_name", "label": "Taxon name"},
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{"attribute": "taxonomy.infrasubspecific_name",
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"label": "Infrasubspecific names"},
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{"attribute": "taxonomy.comments", "label": "Comment on taxonomy"},
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{"attribute": "taxonomy.interspecific_hybrid",
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"label": "Interspecific hybrid"},
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{"attribute": "status", "label": "Status"},
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{"attribute": "history", "label": "History of deposit", },
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{"attribute": "deposit.who", "label": "Depositor"},
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{"attribute": "deposit.date", "label": "Date of deposit"},
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{"attribute": "catalog_inclusion_date",
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"label": "Date of inclusion in the catalogue"},
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{"attribute": "collect.who", "label": "Collected by"},
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{"attribute": "collect.date", "label": "Date of collection"},
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{"attribute": "isolation.who", "label": "Isolated by"},
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{"attribute": "isolation.date", "label": "Date of isolation"},
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{"attribute": "isolation.substrate_host_of_isolation",
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"label": "Substrate/host of isolation"},
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{"attribute": "growth.tested_temp_range",
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"label": "Tested temperature growth range"},
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{"attribute": "growth.recommended_temp",
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"label": "Recommended growth temperature"},
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{"attribute": "growth.recommended_media",
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"label": "Recommended medium for growth"},
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{"attribute": "form_of_supply", "label": "Form of supply"},
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{"attribute": "other_denominations", "label": "Other denomination"},
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{"attribute": "collect.location.coords",
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"label": "Coordinates of geographic origin"},
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{"attribute": "collect.location.altitude",
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"label": "Altitude of geographic origin"},
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{"attribute": "collect.location", "label": "Geographic origin"},
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{"attribute": "collect.habitat", "label": "Isolation habitat"},
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{"attribute": "collect.habitat_ontobiotope",
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"label": "Ontobiotope term for the isolation habitat"},
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{"attribute": "genetics.gmo", "label": "GMO"},
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{"attribute": "genetics.gmo_construction",
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"label": "GMO construction information"},
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{"attribute": "genetics.mutant_info", "label": "Mutant information"},
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{"attribute": "genetics.genotype", "label": "Genotype"},
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{"attribute": "genetics.sexual_state", "label": "Sexual state"},
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{"attribute": "genetics.ploidy", "label": "Ploidy"},
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{"attribute": "genetics.plasmids", "label": "Plasmids"},
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{"attribute": "genetics.plasmids_in_collections",
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"label": "Plasmids collections fields"},
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{"attribute": "publications", "label": "Literature"},
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{"attribute": PLANT_PATHOGENICITY_CODE, "label": "Plant pathogenicity code"},
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{"attribute": "pathogenicity", "label": "Pathogenicity"},
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{"attribute": "enzyme_production", "label": "Enzyme production"},
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{"attribute": "production_of_metabolites",
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"label": "Production of metabolites"},
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{"attribute": "applications", "label": "Applications", },
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{"attribute": "remarks", "label": "Remarks"},
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{"attribute": LITERATURE_LINKED_TO_SEQ_GENOME,
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"label": "Literature linked to the sequence/genome"},
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]
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ALLOWED_SUBTAXA = ["subspecies", "variety", "convarietas", "group", "forma",
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'forma.specialis']
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ALLOWED_TAXONOMIC_RANKS = ["family", "genus", "species"] + ALLOWED_SUBTAXA
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# nagoya
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NAGOYA_NO_RESTRICTIONS = "no_known_restrictions_under_the_Nagoya_protocol"
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NAGOYA_DOCS_AVAILABLE = "documents_providing_proof_of_legal_access_and_terms_of_use_available_at_the_collection"
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NAGOYA_PROBABLY_SCOPE = "strain_probably_in_scope,_please_contact_the_culture_collection"
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ALLOWED_NAGOYA_OPTIONS = [NAGOYA_NO_RESTRICTIONS,
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NAGOYA_DOCS_AVAILABLE, NAGOYA_PROBABLY_SCOPE]
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# Use restriction
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NO_RESTRICTION = "no_restriction"
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ONLY_RESEARCH = "only_research"
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COMMERCIAL_USE_WITH_AGREEMENT = "commercial_use_with_agreement"
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ALLOWED_RESTRICTION_USE_OPTIONS = [
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NO_RESTRICTION,
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ONLY_RESEARCH,
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COMMERCIAL_USE_WITH_AGREEMENT,
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]
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ALLOWED_RISK_GROUPS = ["1", "2", "3", "4"]
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AGAR = "Agar"
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CRYO = "Cryo"
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DRY_ICE = "Dry Ice"
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LIQUID_CULTURE_MEDIUM = "Liquid Culture Medium"
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LYO = "Lyo"
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OIL = "Oil"
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WATER = "Water"
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ALLOWED_FORMS_OF_SUPPLY = [AGAR, CRYO, DRY_ICE,
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LIQUID_CULTURE_MEDIUM, LYO, OIL, WATER]
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DEPOSIT = "deposit"
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ISOLATION = "isolation"
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COLLECT = "collect"
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GROWTH = "growth"
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GENETICS = "genetics"
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TAXONOMY = "taxonomy"
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# Markers
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MARKERS = "markers"
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MARKER_TYPE = "marker_type"
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MARKER_INSDC = "INSDC"
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MARKER_SEQ = "marker_seq"
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ALLOWED_MARKER_TYPES = [
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{"acronym": "16S rRNA", "marker": "16S rRNA"},
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{"acronym": "ACT", "marker": "Actin"},
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{"acronym": "CaM", "marker": "Calmodulin"},
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{"acronym": "EF-1α", "marker": "elongation factor 1-alpha (EF-1α)"},
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{"acronym": "ITS",
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"marker": "nuclear ribosomal Internal Transcribed Spacer (ITS)"},
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{"acronym": "LSU", "marker": "nuclear ribosomal Large SubUnit (LSU)"},
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{"acronym": "RPB1", "marker": "Ribosomal RNA-coding genes RPB1"},
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{"acronym": "RPB2", "marker": "Ribosomal RNA-coding genes RPB2"},
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{"acronym": "TUBB", "marker": "β-Tubulin"},
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]
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PUBLICATIONS = "publications"
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PUB_ID = "id"
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PUB_DOI = "pub_doi"
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PUB_PUBMED_ID = ''
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PUB_FULL_REFERENCE = "full_reference"
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PUB_TITLE = "title"
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PUB_AUTHORS = "authors"
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PUB_JOURNAL = "journal"
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PUB_YEAR = "year"
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PUB_VOLUME = "volume"
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PUB_ISSUE = "issue"
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PUB_FIRST_PAGE = "first_page"
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PUB_LAST_PAGE = "last_page"
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BOOK_TITLE = "book_title"
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BOOK_EDITOR = "book_editor"
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BOOK_PUBLISHER = "book_publisher"
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PUBLICATION_FIELDS = [
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{"label": "ID", "attribute": PUB_ID},
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{"label": "Full reference", "attribute": PUB_FULL_REFERENCE},
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{"label": "Authors", "attribute": PUB_AUTHORS},
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{"label": "Title", "attribute": PUB_TITLE},
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{"label": "Journal", "attribute": PUB_JOURNAL},
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{"label": "Year", "attribute": PUB_YEAR},
|
||||
{"label": "Volume", "attribute": PUB_VOLUME},
|
||||
{"label": "Issue", "attribute": PUB_ISSUE},
|
||||
{"label": "First page", "attribute": PUB_FIRST_PAGE},
|
||||
{"label": "Last page", "attribute": PUB_FIRST_PAGE},
|
||||
{"label": "Book title", "attribute": BOOK_TITLE},
|
||||
{"label": "Editors", "attribute": BOOK_EDITOR},
|
||||
{"label": "Publisher", "attribute": BOOK_PUBLISHER},
|
||||
]
|
||||
|
||||
|
||||
# ploidy
|
||||
ANEUPLOID = 0
|
||||
HAPLOID = 1
|
||||
DIPLOID = 2
|
||||
TRIPLOID = 3
|
||||
TETRAPLOID = 4
|
||||
POLYPLOID = 9
|
||||
|
||||
ALLOWED_PLOIDIES = [ANEUPLOID, HAPLOID, DIPLOID, TRIPLOID, TETRAPLOID,
|
||||
POLYPLOID]
|
||||
|
||||
SUBTAXAS = {
|
||||
"subsp.": "subspecies",
|
||||
"var.": "variety",
|
||||
"convar.": "convarietas",
|
||||
"group.": "group",
|
||||
"f.": "forma",
|
||||
"f.sp.": "forma.specialis"
|
||||
}
|
||||
|
||||
|
||||
#Control
|
||||
VERSION = "Version"
|
||||
DATE = "Date"
|
||||
|
||||
|
||||
#Controle files
|
||||
CONTROL_FIELDS = [
|
||||
{"label": "Version", "attribute": VERSION},
|
||||
{"label": "Date", "attribute": DATE},
|
||||
]
|
||||
|
||||
# Excel sheet name
|
||||
LOCATIONS = "Geographic origin" # 'Locations'
|
||||
GROWTH_MEDIA = "Growth media"
|
||||
GENOMIC_INFO = "Genomic information"
|
||||
STRAINS = "Strains"
|
||||
LITERATURE_SHEET = "Literature"
|
||||
SEXUAL_STATE_SHEET = "Sexual state"
|
||||
RESOURCE_TYPES_VALUES = "Resource types values"
|
||||
FORM_OF_SUPPLY_SHEET = "Forms of supply"
|
||||
PLOIDY_SHEET = "Ploidy"
|
||||
ONTOBIOTOPE = "Ontobiotope"
|
||||
MARKERS = "Markers"
|
||||
CONTROL_SHEET = "Version"
|
||||
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@@ -16,20 +16,19 @@ from mirri.validation.tags import (CHOICES, COLUMNS, COORDINATES, CROSSREF, CROS
|
||||
TYPE, UNIQUE, VALIDATION, VALUES, BIBLIO, DOMINIO,URL_DOMINIO, ISO, URL_TITLE,JUST_URL,TITLE,
|
||||
HISTORY,NAGOYA1, VERSION)
|
||||
from mirri.settings import LOCATIONS, SUBTAXAS
|
||||
from mirri.settings_v1 import LOCATIONS, SUBTAXAS
|
||||
from mirri.validation.validation_conf_12052023 import version_config
|
||||
|
||||
from mirri.validation.validation_conf_12052023 import MIRRI_12052023_VALLIDATION_CONF
|
||||
|
||||
def validate_mirri_excel(fhand, version="", date=""):
|
||||
configuration = version_config.get(version)
|
||||
if configuration is None:
|
||||
raise NotImplementedError("Unsupported version: " + version)
|
||||
configuration["date"] = date or configuration.get("date")
|
||||
if configuration["date"] != "12/05/2023":
|
||||
raise ValueError("Invalid date. Expected: 12/05/2023")
|
||||
return validate_excel(fhand, configuration)
|
||||
|
||||
|
||||
def validate_mirri_excel(fhand, version= "5.1.2" ):
|
||||
if version == "5.1.2":
|
||||
configuration = MIRRI_12052023_VALLIDATION_CONF
|
||||
else:
|
||||
raise NotImplementedError("Only version 5.1.2 is implemented")
|
||||
|
||||
return validate_excel(fhand, configuration)
|
||||
|
||||
def version(value , validation_conf=None):
|
||||
if value is None:
|
||||
return True
|
||||
@@ -210,8 +209,6 @@ def validate_row(row, validation_steps, in_memory_sheets):
|
||||
kind = validation_step[TYPE]
|
||||
error_code = validation_step[ERROR_CODE]
|
||||
if kind == NAGOYA:
|
||||
if not is_valid_nagoya_v20200601(row, in_memory_sheets):
|
||||
return error_code
|
||||
if not is_valid_nagoya_v12052023(row, in_memory_sheets):
|
||||
return error_code
|
||||
elif kind == BIBLIO:
|
||||
@@ -281,39 +278,10 @@ def is_valid_nago(row):
|
||||
return True
|
||||
|
||||
def parsee_mirri_excel(row, in_memory_sheets, version=""):
|
||||
if version == "20200601":
|
||||
return is_valid_nagoya_v20200601 (row, in_memory_sheets)
|
||||
elif version == "12052023":
|
||||
if version == "12052023":
|
||||
return is_valid_nagoya_v12052023 (row, in_memory_sheets)
|
||||
else:
|
||||
raise NotImplementedError("Only versions 20200601 and 12052023 are implemented")
|
||||
|
||||
def is_valid_nagoya_v20200601(row, in_memory_sheets): # sourcery skip: return-identity
|
||||
location_index = row.get('Geographic origin', None)
|
||||
if location_index is None:
|
||||
country = None
|
||||
else:
|
||||
geo_origin = in_memory_sheets[LOCATIONS].get(location_index, {})
|
||||
country = geo_origin.get('Country', None)
|
||||
|
||||
_date = row.get("Date of collection", None)
|
||||
if _date is None:
|
||||
_date = row.get("Date of isolation", None)
|
||||
if _date is None:
|
||||
_date = row.get("Date of deposit", None)
|
||||
if _date is None:
|
||||
_date = row.get("Date of inclusion in the catalogue", None)
|
||||
if _date is not None:
|
||||
year = _date.year if isinstance(_date, datetime) else int(str(_date)[:4])
|
||||
else:
|
||||
year = None
|
||||
|
||||
if year is not None and year >= 2014 and country is None:
|
||||
return False
|
||||
|
||||
|
||||
|
||||
return True
|
||||
raise NotImplementedError("Only version is implemented")
|
||||
|
||||
def is_valid_nagoya_v12052023(row, in_memory_sheets): # sourcery skip: return-identity
|
||||
location_index = row.get('geographicOrigin', None)
|
||||
|
||||
@@ -9,10 +9,9 @@ from mirri.validation.excel_validator import validate_mirri_excel
|
||||
def main():
|
||||
path = Path(sys.argv[1])
|
||||
version = str(sys.argv[2])
|
||||
date = str(sys.argv[3])
|
||||
try:
|
||||
|
||||
error_log = validate_mirri_excel(path.open("rb"), version=version, date=date)
|
||||
error_log = validate_mirri_excel(path.open("rb"), version=version)
|
||||
|
||||
except NotImplementedError as e:
|
||||
print(e)
|
||||
|
||||
@@ -4,7 +4,7 @@ from mirri.validation.tags import (CHOICES, COLUMNS, COORDINATES, CROSSREF, CROS
|
||||
UNIQUE,VERSION,
|
||||
VALIDATION, VALUES, BIBLIO, DOMINIO, URL_DOMINIO,ISO, JUST_URL, URL_TITLE, TITLE, HISTORY,NAGOYA1)
|
||||
from mirri.settings import (ONTOBIOTOPE, LOCATIONS, GROWTH_MEDIA, GENOMIC_INFO,
|
||||
STRAINS, LITERATURE_SHEET, SEXUAL_STATE_SHEET, MARKERS, CONTROL_SHEET,)
|
||||
STRAINS, LITERATURE_SHEET, SEXUAL_STATE_SHEET, MARKERS, CONTROL_SHEET)
|
||||
|
||||
|
||||
|
||||
@@ -323,7 +323,7 @@ STRAIN_FIELDS = [
|
||||
{
|
||||
FIELD: "plasmidCollections",
|
||||
VALIDATION: [
|
||||
{TYPE: REGEXP, MATCH: "([a-zA-Z .'-]+)\(([a-zA-Z .'-]+) (\d+)\)(;([a-zA-Z .'-]+)\(([a-zA-Z .'-]+) (\d+)\))*$",
|
||||
{TYPE: REGEXP, MATCH: "([a-zA-Z .'-]+)\(([a-zA-Z .'-]+) (\d+)\)(\s*;([a-zA-Z .'-]+)\(([a-zA-Z .'-]+) (\d+)\))*$",
|
||||
ERROR_CODE: "STD62"}
|
||||
]
|
||||
},
|
||||
@@ -358,7 +358,7 @@ STRAIN_FIELDS = [
|
||||
{
|
||||
FIELD: "sequenceLiterature",
|
||||
VALIDATION: [
|
||||
{TYPE: REGEXP, MATCH: "^\d+(;?\s*\d+)*$", ERROR_CODE: "STD61"},
|
||||
{TYPE: REGEXP, MATCH: "^\d+(\s*;?\s*\d+)*$", ERROR_CODE: "STD61"},
|
||||
]
|
||||
|
||||
},
|
||||
|
||||
@@ -1,545 +0,0 @@
|
||||
from mirri.validation.tags import (CHOICES, COLUMNS, COORDINATES, CROSSREF, CROSSREF_NAME, DATE,
|
||||
ERROR_CODE, FIELD, MANDATORY, MATCH,
|
||||
MISSING, MULTIPLE, NAGOYA, NUMBER, REGEXP, ROW_VALIDATION, SEPARATOR, TAXON, TYPE,
|
||||
UNIQUE,
|
||||
VALIDATION, VALUES, BIBLIO)
|
||||
from mirri.settings_v1 import (ONTOBIOTOPE, LOCATIONS, GROWTH_MEDIA, GENOMIC_INFO,
|
||||
STRAINS, LITERATURE_SHEET, SEXUAL_STATE_SHEET, MARKERS)
|
||||
# GEOGRAPHIC_ORIGIN
|
||||
# SEXUAL_STATE_SHEET,
|
||||
# RESOURCE_TYPES_VALUES,
|
||||
# FORM_OF_SUPPLY_SHEET,
|
||||
# PLOIDY_SHEET)
|
||||
|
||||
|
||||
STRAIN_FIELDS = [
|
||||
{
|
||||
FIELD: "Accession number",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: 'STD01'},
|
||||
{TYPE: UNIQUE, ERROR_CODE: 'STD03'},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD02"},
|
||||
{TYPE: REGEXP, MATCH: "[^ ]* [^ ]*", ERROR_CODE: "STD04"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Restrictions on use",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD05"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD06"},
|
||||
{TYPE: CHOICES, VALUES: ["1", "2", "3"],
|
||||
MULTIPLE: False, ERROR_CODE: "STD07"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Nagoya protocol restrictions and compliance conditions",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD08"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD09"},
|
||||
{TYPE: CHOICES, VALUES: ["1", "2", "3"],
|
||||
MULTIPLE: False, ERROR_CODE: "STD10"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "ABS related files",
|
||||
VALIDATION: [],
|
||||
},
|
||||
{
|
||||
FIELD: "MTA file",
|
||||
VALIDATION: [],
|
||||
},
|
||||
{
|
||||
FIELD: "Other culture collection numbers",
|
||||
# VALIDATION: [
|
||||
# {TYPE: REGEXP, "match": "[^ ]* [^ ]*", ERROR_CODE: "STD07",
|
||||
# MULTIPLE: True, SEPARATOR: ";"}
|
||||
# ]
|
||||
},
|
||||
{
|
||||
FIELD: "Strain from a registered collection",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["1", "2"],
|
||||
ERROR_CODE: "STD11"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Risk Group",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD12"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD13"},
|
||||
{TYPE: CHOICES, VALUES: ["1", "2", "3", "4"],
|
||||
MULTIPLE: False, ERROR_CODE: "STD14"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Dual use",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["1", "2"],
|
||||
ERROR_CODE: "STD15"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Quarantine in Europe",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["1", "2"],
|
||||
ERROR_CODE: "STD16"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Organism type",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD17"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD18"},
|
||||
{TYPE: CHOICES, VALUES: ["Algae", "Archaea", "Bacteria",
|
||||
"Cyanobacteria", "Filamentous Fungi",
|
||||
"Phage", "Plasmid", "Virus", "Yeast",
|
||||
"1", "2", "3", "4", "5", "6", "7", "8", "9"],
|
||||
MULTIPLE: True, SEPARATOR: ";", ERROR_CODE: "STD19"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Taxon name",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD20"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD21"},
|
||||
{TYPE: TAXON, ERROR_CODE: "STD22", MULTIPLE: True,
|
||||
SEPARATOR: ';'}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Infrasubspecific names",
|
||||
},
|
||||
{
|
||||
FIELD: "Comment on taxonomy",
|
||||
},
|
||||
{
|
||||
FIELD: "Interspecific hybrid",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["1", "2"],
|
||||
ERROR_CODE: "STD23"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Status",
|
||||
},
|
||||
{
|
||||
FIELD: "History of deposit",
|
||||
VALIDATION: [
|
||||
# {TYPE: REGEXP, "match": "[^ ]* [^ ]*", ERROR_CODE: "STD24", # modify the regex
|
||||
# MULTIPLE: True, SEPARATOR: ";"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Depositor"
|
||||
},
|
||||
{
|
||||
FIELD: "Date of deposit",
|
||||
VALIDATION: [
|
||||
{TYPE: DATE, ERROR_CODE: "STD25"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Date of inclusion in the catalogue",
|
||||
VALIDATION: [
|
||||
{TYPE: DATE, ERROR_CODE: "STD26"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Collected by",
|
||||
},
|
||||
{
|
||||
FIELD: "Date of collection",
|
||||
VALIDATION: [
|
||||
{TYPE: DATE, ERROR_CODE: "STD27"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Isolated by",
|
||||
},
|
||||
{
|
||||
FIELD: "Date of isolation",
|
||||
VALIDATION: [
|
||||
{TYPE: DATE, ERROR_CODE: "STD28"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Substrate/host of isolation",
|
||||
},
|
||||
{
|
||||
FIELD: "Tested temperature growth range",
|
||||
VALIDATION: [
|
||||
{TYPE: REGEXP, "match": r'[+-]?(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?',
|
||||
ERROR_CODE: "STD29", MULTIPLE: True, SEPARATOR: ";"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Recommended growth temperature",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD30"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD31"},
|
||||
{TYPE: REGEXP, "match": r'[+-]?(\d+(\.\d*)?|\.\d+)([eE][+-]?\d+)?',
|
||||
ERROR_CODE: "STD32",
|
||||
MULTIPLE: True, SEPARATOR: ";"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Recommended medium for growth",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD33"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD34"},
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: "Growth media",
|
||||
MULTIPLE: True, SEPARATOR: "/", ERROR_CODE: "STD35"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Form of supply",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "STD36"},
|
||||
{TYPE: MISSING, ERROR_CODE: "STD37"},
|
||||
{TYPE: CHOICES, VALUES: ['Agar', 'Cryo', 'Dry Ice', 'Liquid Culture Medium',
|
||||
'Lyo', 'Oil', 'Water'],
|
||||
MULTIPLE: True, SEPARATOR: ";", ERROR_CODE: "STD38"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Other denomination",
|
||||
},
|
||||
{
|
||||
FIELD: "Coordinates of geographic origin",
|
||||
VALIDATION: [
|
||||
{TYPE: COORDINATES, ERROR_CODE: "STD39"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Altitude of geographic origin",
|
||||
VALIDATION: [
|
||||
{TYPE: NUMBER, 'max': 8000, 'min': -200, ERROR_CODE: "STD40"},
|
||||
]
|
||||
},
|
||||
{
|
||||
# value can be in the cell or in another sheet. Don't configure this
|
||||
FIELD: "Geographic origin",
|
||||
},
|
||||
{
|
||||
FIELD: "Isolation habitat",
|
||||
},
|
||||
{
|
||||
FIELD: "Ontobiotope term for the isolation habitat",
|
||||
VALIDATION: [
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: "Ontobiotope",
|
||||
MULTIPLE: True, SEPARATOR: ";", ERROR_CODE: "STD41"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "GMO",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["1", "2"],
|
||||
ERROR_CODE: "STD42"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "GMO construction information",
|
||||
},
|
||||
{
|
||||
FIELD: "Mutant information",
|
||||
},
|
||||
{
|
||||
FIELD: "Genotype",
|
||||
},
|
||||
{
|
||||
FIELD: "Sexual state",
|
||||
VALIDATION: [
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: SEXUAL_STATE_SHEET,
|
||||
ERROR_CODE: "STD43"}
|
||||
# {TYPE: CHOICES, VALUES: ["Mata", "Matalpha", "Mata/Matalpha",
|
||||
# "Matb", "Mata/Matb", "MTLa", "MTLalpha", "MTLa/MTLalpha",
|
||||
# "MAT1-1", "MAT1-2", "MAT1", "MAT2", "MT+", "MT-"],
|
||||
# ERROR_CODE: "STD43"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Ploidy",
|
||||
VALIDATION: [
|
||||
{TYPE: CHOICES, VALUES: ["0", "1", "2", "3", "4", "9"],
|
||||
ERROR_CODE: "STD44"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Plasmids",
|
||||
},
|
||||
{
|
||||
FIELD: "Plasmids collections fields",
|
||||
},
|
||||
{
|
||||
# value can be in the cell or in another sheet. Don't configure this
|
||||
FIELD: "Literature",
|
||||
VALIDATION: [
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: LITERATURE_SHEET,
|
||||
MULTIPLE: True, SEPARATOR: ";", ERROR_CODE: "STD45"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Plant pathogenicity code",
|
||||
},
|
||||
{
|
||||
FIELD: "Pathogenicity",
|
||||
},
|
||||
{
|
||||
FIELD: "Enzyme production",
|
||||
},
|
||||
{
|
||||
FIELD: "Production of metabolites",
|
||||
},
|
||||
{
|
||||
FIELD: "Applications",
|
||||
},
|
||||
{
|
||||
FIELD: "Remarks"
|
||||
},
|
||||
{
|
||||
FIELD: "Literature linked to the sequence/genome",
|
||||
},
|
||||
]
|
||||
SHEETS_SCHEMA = {
|
||||
LOCATIONS: {
|
||||
"acronym": "GOD",
|
||||
"id_field": "ID",
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS02"},
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "ID",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GOD01"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GOD02"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Country",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GOD03"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GOD04"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Region",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "City",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "Locality",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GOD06"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GOD07"}
|
||||
]
|
||||
}
|
||||
],
|
||||
},
|
||||
GROWTH_MEDIA: {
|
||||
"acronym": "GMD",
|
||||
"id_field": "Acronym",
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS01"},
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "Acronym",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GMD01"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GMD02"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Description",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GMD03"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GMD04"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Full description",
|
||||
VALIDATION: []
|
||||
},
|
||||
],
|
||||
},
|
||||
GENOMIC_INFO: {
|
||||
"acronym": "GID",
|
||||
"id_field": "Strain AN",
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS08"},
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "Strain AN",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GID01"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GID02"},
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: "Strains",
|
||||
ERROR_CODE: "GID03"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Marker",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GID04"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GID05"},
|
||||
{TYPE: CROSSREF, CROSSREF_NAME: MARKERS, ERROR_CODE: "GID06"}
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "INSDC AN",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "GID07"},
|
||||
{TYPE: MISSING, ERROR_CODE: "GID08"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Sequence",
|
||||
VALIDATION: []
|
||||
},
|
||||
],
|
||||
},
|
||||
STRAINS: {
|
||||
"acronym": "STD",
|
||||
'id_field': 'Accession number',
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS05"},
|
||||
ROW_VALIDATION: [
|
||||
{TYPE: NAGOYA, ERROR_CODE: "STD46"},
|
||||
],
|
||||
COLUMNS: STRAIN_FIELDS,
|
||||
},
|
||||
LITERATURE_SHEET: {
|
||||
"acronym": "LID",
|
||||
'id_field': 'ID',
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS03"},
|
||||
ROW_VALIDATION: [
|
||||
{TYPE: BIBLIO, ERROR_CODE: 'LID17'}
|
||||
],
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "ID",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID01"},
|
||||
{TYPE: MISSING, ERROR_CODE: "LID02"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Full reference",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID03"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Authors",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID05"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Title",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID07"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Journal",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID09"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Year",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID11"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Volume",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID13"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Issue",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "First page",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "LID15"},
|
||||
{TYPE: MISSING, ERROR_CODE: "LID16"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Last page",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "Book title",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "Editors",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "Publisher",
|
||||
VALIDATION: []
|
||||
}
|
||||
],
|
||||
},
|
||||
# SEXUAL_STATE_SHEET: {"acronym": "SSD", COLUMNS: []},
|
||||
# RESOURCE_TYPES_VALUES: {"acronym": "RTD", COLUMNS: []},
|
||||
# FORM_OF_SUPPLY_SHEET: {"acronym": "FSD", COLUMNS: []},
|
||||
# PLOIDY_SHEET: {"acronym": "PLD", COLUMNS: []},
|
||||
ONTOBIOTOPE: {
|
||||
"acronym": "OTD",
|
||||
"id_field": "ID",
|
||||
VALIDATION: {TYPE: MANDATORY, ERROR_CODE: "EFS06"},
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "ID",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "OTD01"},
|
||||
{TYPE: MISSING, ERROR_CODE: "OTD02"},
|
||||
]
|
||||
},
|
||||
{
|
||||
FIELD: "Name",
|
||||
VALIDATION: [
|
||||
{TYPE: MANDATORY, ERROR_CODE: "OTD03"},
|
||||
{TYPE: MISSING, ERROR_CODE: "OTD04"},
|
||||
]
|
||||
},
|
||||
]
|
||||
},
|
||||
MARKERS: {
|
||||
"acronym": "MKD",
|
||||
"id_field": "Acronym",
|
||||
COLUMNS: [
|
||||
{
|
||||
FIELD: "Acronym",
|
||||
VALIDATION: []
|
||||
},
|
||||
{
|
||||
FIELD: "Marker",
|
||||
VALIDATION: []
|
||||
},
|
||||
],
|
||||
},
|
||||
}
|
||||
|
||||
CROSS_REF_CONF = {
|
||||
ONTOBIOTOPE: ['ID', 'Name'],
|
||||
LITERATURE_SHEET: ['ID'],
|
||||
LOCATIONS: ['Locality'],
|
||||
GROWTH_MEDIA: ['Acronym'],
|
||||
STRAINS: ["Accession number"],
|
||||
SEXUAL_STATE_SHEET: [],
|
||||
MARKERS: ["Acronym"],
|
||||
}
|
||||
|
||||
MIRRI_20200601_VALLIDATION_CONF = {
|
||||
'sheet_schema': SHEETS_SCHEMA,
|
||||
'cross_ref_conf': CROSS_REF_CONF,
|
||||
'keep_sheets_in_memory': [
|
||||
{'sheet_name': LOCATIONS, 'indexed_by': 'Locality'}]
|
||||
}
|
||||
Reference in New Issue
Block a user